Publications
2023
1. Anton P. J. Stampfl, Zhongdong Liu, Jun Hu, Kei Sawada, H. Takano, Yoshiki Kohmura, Tetsuya Ishikawa, Jae-Hong Lim, Jung-Ho Je, Chian-Ming Low, Alvin Teo, Eng Soon Tok, Tin Wee Tan, Kenneth Ban, Camilo Libedinsky, Francis Chee Kuan Tan, Kuan-Peng Chen, An-Cheng Yang, Chao-Chun Chuang, Nan-Yow Chen, Chi-Tin Shih, Ting-Kuo Lee, De-Nian Yang, Hsu-Chao Lai, Hong-Han Shuai, Chang-Chieh Cheng, Yu-Tai Ching, Chia-Wei Li, Ching-Che Charng, Chung-Chuan Lo, Ann-Shyn Chiang, Benoit Recur, Cyril Petibois, Chia-Liang Cheng, Hsiang-Hsin Chen, Shun-Min Yang, Yeukuang Hwu, Catleya Rojviriya, Supagorn Rugmai, Saroj Rujirawat, Giorgio Margaritondo: “SYNAPSE : an International Roadmap to Large Brain Imaging”, Physics Reports, 999,1-60 (2023). DOI: 10.1016/j.physrep.2022.11.003
2022
2. Yoshiki Kohmura, Shun-Min Yang, Hsiang-Hsin Chen, Hidekazu Takano, Chia-Ju Chang, Ya-Sian Wang, Tsung-Tse Lee, Ching-Yu Chiu, Kai-En Yang, Yu-Ting Chien, Huan-Ming Hu, Tzu-Ling Su, Cyril Petibois, Yi-Yun Chen, Cheng-Huan Hsu, Peilin Chen, Dueng-Yuan Hueng, Shean-Jen Chen, Chi Lin Yang, An-Lun Chin, Chian-Ming Low, Francis Chee Kuan Tan, Alvin Teo, Eng Soon Tok, Xu Xiang Cai, Hong-Ming Lin, John Boeckl, Anton P. Stampfl, Jumpei Yamada, Satoshi Matsuyama, Tetsuya Ishikawa, Giorgio Margaritondo, Ann-Shyn Chiang and Yeukuang Hwu: “The new X-ray/visible microscopy MAXWELL technique for fast three-dimensional nanoimaging with isotropic resolution”, Scientific Reports, 12, 9668 (2022). DOI: 10.1038/s41598-022-13377-w
1. Feng-Chun Hsu, Chun-Yu Lin, Yvonne Yuling Hu, Yeu-kuang Hwu, Ann-Shyn Chiang, and Shean-Jen Chen: “Light-field microscopy with temporal focusing multiphoton illumination for scanless volumetric bioimaging”, Biomedical Optics Express, 13 (12), 6610-6620 (2022).
DOI: 10.1364/BOE.473807
2021
6. Yun-Syuan Yan, Yen-Hua Chen, Chun-Chieh Wang, Yeukuang Hwu, Yao-Chang Lee, HwoShuenn Sheu, Cheng-Cheng Chiang: “Faults caused by the fault: Microstructural and mineral characterization of deformation in Chungliao Tunnel, Taiwan, caused by Chishan Fault”. Engineering Geology 292,106245 (2021). DOI: 10.1016/j.enggeo.2021.106245
5. Hsiang-Hsin Chen, Shun-Min Yang, Kai-En Yang, Ching-Yu Chiu, Chia-Ju Chang, YaSianWang, Tsung-Tse Lee, Yu-Fen Huang, Yi-Yun Chen, Cyril Petibois, Shih-Hung Chang, Xiaoqing Cai, Chian-Ming Low, Francis Chee Kuan Tan, Alvin Teo, Eng Soon Tok, JaeHong Lim, Jun-Ho Je, Yoshiki Kohmura, Tetsuya Ishikawa, Giorgio Margaritondo and Yeukuang Hwu: “High-resolution Fast Tomography Brain Imaging Beamline at the Taiwan Photon Source” J. Synchrotron Radiat. 28, 1662-1668 (2021). DOI: 10.1107/S1600577521007633
4. G. Margaritondo and Y. Hwu: “Imaging with Coherent X-rays: From the Early Synchrotron Tests to SYNAPSE”. J. Imaging 7, 132 (2021).
3. Wang, Chun-Hsiung; Chen, Dong-Hua; Huang, Shih-Hsin; Wu, Yi-Min; Chen, Yi-Yun; Hwu, Yeukuang; Bushnell, David; Kornberg, Roger; Chang, Wei-Hau: “Sub-3 A Cryo-EM Structures of Necrosis Virus Particles via the Use of Multipurpose TEM with Electron Counting Camera.”, International Journal of Molecular Sciences, 22, 6859 (2021) DOI: 10.3390/ijms22136859
2. Yeukuang Hwu and Giorgio Margaritondo: “Synchrotron Radiation and X-Ray Free Electron Lasers (X-FELs) Explained to all Users, Active and Potential”, J. Synchrotron Radiat. 28, 1014-1029 (2021). DOI: 10.1107/S1600577521003325
1.Yeukuang Hwu and Giorgio Margaritondo: “Synchrotron Radiation and Sensors: a History of Synergies”, IEEE Sensors Journal, 21, 12764-12773 (2021). DOI: https://doi.org/10.1109/JSEN.2020.3023292
2020
3. Shin-Ruen Yang, Kuo-Feng Hua, Lichieh Julie Chu, Yeu-Kuang Hwu, Shun-Min Yang, Chung-Yao Wu, Tsai-Jung Lin, Jui-Chun Weng, Hailin Zhao, Wan-Han Hsu, Feng-Cheng Liu, Wen-Jinn Liaw, Daqing Ma, Shuk-Man Ka, Ann Chen: “Xenon blunts NF-kB/NLRP3 inflammasome activation and improves acute onset of accelerated and severe lupus nephritis in mice”, Kidney International 98,378-390 (2020). DOI: 10.1016/j.kint.2020.02.033
2. An-Lun Chin, Shun-Min Yang, Hsiang-Hsin Chen, Min-Tsang Li, Tsung-Tse Lee, Ying-Jie Chen, Ting-Kuo Lee, Cyril Petibois, Xiaoqing Cai, Chian-Ming Low, Francis Chee Kuan Tan, Alvin Teo, Eng Soon Tok, Edwin B.L. Ong, Yen-Yin Lin, I-Jin Lin, Yi-Chi Tseng, Nan-Yow Chen, Chi-Tin Shih, Jae-Hong Lim, Jun Lim, Jung-Ho Je, Yoshiki Kohmura, Tetsuya Ishikawa, Giorgio Margaritondo, Ann-Shyn Chiang, Yeukuang Hwu: “A Synchrotron X-ray Imaging Strategy to Map Large Animal Brains”, Chinese J. Phys. 65, 24-32 (2020). DOI: 10.1016/j.cjph.2020.01.010
1. Chi-Feng Huang, Wei-Hau Chang, Ting-Kuo Lee, Yasumasa Joti, Yoshinori Nishino, Takashi Kimura, Akihiro Suzuki, Yoshitaka Bessho, Tsung-Tse Lee, Mei-Chun Chen, Shun-Min Yang, Yeukuang Hwu, Shih-Hsin Huang, Po-Nan Li, Peilin Chen, Yung-Chieh Tseng, Che Ma, Tsui-Ling Hsu, Chi-Huey Wong, Kensuke Tono, Tetsuya Ishikawa, Keng S Liang: “XFEL coherent diffraction imaging for weakly scattering particles using heterodyne interference.” AIP Advances 10 (5), 055219 (2020). DOI: 10.1063/1.5129406
2019
6. Wei-Ling Chang, Hao Wu, Yu-Kun Chiu, Shuo Wang, Ting-Xin Jiang, Zhong-Lai Luo, Yen-Cheng Lin, Ang Li, Jui-Ting Hsu, Heng-Li Huang, How-Jen Gu, Tse-Yu Lin, Shun-Min Yang, Tsung-Tse Lee, Yung-Chi Lai, Mingxing Lei, Ming-You Shie, Cheng-Te Yao, Yi-Wen Chen, JC Tsai, Shyh-Jou Shieh, Yeu-Kuang Hwu, Hsu-Chen Cheng, Pin-Chi Tang, Shih-Chieh Hung, Chih-Feng Chen, Michael Habib, Randall B Widelitz, Ping Wu, Wen-Tau Juan, Cheng-Ming Chuong: “The Making of a Flight Feather: Bio-architectural Principles and Adaptation” Cell 179 (6), 1409-1423. e17 (2019). DOI: 10.1016/j.cell.2019.11.008
5. Jhih-Heng Yang, Ning-Jung Chen, YeuKuang Hwu, Chien-Chun Chen: “Algorithm for characterizing the subcellular structures of nanometer-sized biological specimens in a solution using x-ray free-electron lasers” Physical Review Materials, 3, 123803 (2019). DOI: 10.1103/PhysRevMaterials.3.123803
4. M-T Li, S-F Lai, S-M Yang, Y-S Chen, Y-J Chen, Eng Soon Tok, Giorgio Margaritondo, Yeukuang Hwu: “Gold nano-mesh synthesis by continuous-flow X-ray irradiation”, J. Synchrotron Rad. 26, 1929-1935 (2019). DOI: 10.1107/S1600577519011834
3. Li-An Chu, Chieh-Han Lu, Shun-Min Yang, Yen-Ting Liu, Kuan-Lin Feng, Yun-Chi Tsai, Wei-Kun Chang, Wen-Cheng Wang, Shu-Wei Chang, Peilin Chen, Ting-Kuo Lee, Yeu-Kuang Hwu, and Ann-Shyn Chiang, Bi-Chang Chen: “Rapid single-wavelength lightsheet localization microscopy for clarified tissue”, Nat. Comm. 10, 4762 (2019). DOI: 10.1038/s41467-019-12715-3
2. Chieh-Han Lu, Wei-Chun Tang, Yen-Ting Liu, Shu-Wei Chang, Frances Camille M Wu, Chin-Yi Chen, Yun-Chi Tsai, Shun-Min Yang, Chiung-Wen Kuo, Yasushi Okada, Yeu-Kuang Hwu, Peilin Chen, Bi-Chang Chen: “Lightsheet localization microscopy enables fast, large-scale, and three-dimensional super-resolution imaging”, Commun. Biol. 2, 177 (2019). DOI: 10.1038/s42003-019-0403-9
1. David Scott Coburn, Evgeny Nazaretski, Weihe Xu, Mingyuan Ge, Cindy Longo, Huijuan Xu, Kazimierz Gofron, Zhijian Yin, Huang Han Chen, Yeukuang Hwu, Wah-Keat Lee “Design, characterization, and performance of a hard x-ray transmission microscope at the National Synchrotron Light Source II 18-ID beamline”, Rev. Sci. Instrum. 90, 53701 (2019). DOI: 10.1063/1.5088124
2018
6. Chun-Chih Hu, Gong-Her Wu, Sheng-Feng Lai, Muniesh Muthaiyan Shanmugam, Y. Hwu, Oliver I. Wagner, Ta-Jen Yen: “Toxic Effects of Size-tunable Gold Nanoparticles on Caenorhabditis elegans Development and Gene Regulation”, Sci. Rep. 8, 15245 (2018). DOI: 10.1038/s41598-018-33585-7
5. Chang-Chieh Cheng, Yu-Tai Ching, Pai-Hung Ko, Yeukuang Hwu: “Correction of center of rotation and projection angle in synchrotron X-ray computed tomography”, Sci. Rep. 8, 9884 (2018). DOI: 10.1038/s41598-018-28149-8
4. Hsiang-Hsin Chen, Tsung-Tse Lee, Ann Chen, Yeukuang Hwu, Cyril Petibois, “3D digital pathology for a chemical-functional analysis of glomeruli in health and pathology”, Anal. Chem., 90 (6), 3811-3818 (2018). DOI: 10.1021/acs.analchem.7b04265
3. Chi-Feng Huang, Keng S. Liang, Tsui-Ling Hsu, Tsung-Tse Lee, Yi-Yun Chen, Shun-Min Yang, Hsiang-Hsin Chen, Shih-Hsin Huang, Wei-Hau Chang, Peilin Chen, Tin-Kuo Lee, Kuei-En Peng, Chien-Chun Chen, Cheng-Zhi Shi, Yu-Fang Hu, Giorgio Margaritondo, Tetsuya Ishikawa, Chi-Huey Wong and Yeukuang Hwu*: “Free-Electron-Laser Coherent Diffraction Images Individual Drug-Carrying Liposome Particles in Solution”, Nanoscale 10, 2820-2824 (2018). DOI: 10.1039/C7NR09395K
2. Abiodun Ogunleke, Benoit Recur, Hugo Balacey, Hsiang-Hsin Chen, Maylis Delugin, Yeukuang Hwu, Sophie Javerzat and Cyril Petibois*: “3D chemical imaging of the brain using quantitative IR spectro-microscopy”, Chem. Sci., 9, 189-198 (2018). DOI: 10.1039/C7SC03306K
1. Yung-Chieh Liu, Wen-Sung Chung, Chun-Chieh Yu, Su-Ting Hsu, Fung-Lan Chan, Tsung-Han Liu, Chia-Hao Su, Yeukuang Hwu, N. Justin Marshall, Chuan-Chin Chiao*: “Morphological changes of the optic lobe from late embryonic to adult stages in oval squids Sepioteuthis lessoniana”, J. Morphology 279, 75-85 (2018). DOI: 10.1002/jmor.20755
2017
4. Yeukuang Hwu*, Giorgio Margaritondo* and Ann-Shyn Chiang*: “Q&A: Why use synchrotron x-ray tomography for multi-scale connectome mapping?”, BMC Biology 15, 122 (2017). DOI: 10.1186/s12915-017-0461-8.
3. Evgeny Nazaretski*, Hanfei Yan, Kenneth Lauer, Nathalie Bouet, Xiaojing Huang, Weihe Xu, Juan Zhou, Deming Shu, Yeukuang Hwu and Yong Chu: “Design and performance of a hard x-ray scanning microscope at the nanoprobe beamline of NSLS-II”, J. Synchrotron Radiat. 24, 1113-1119 (2017). DOI: 10.1107/S1600577517011183
2. Yu-Chuan Lin, Yeukuang Hwu, Guo-Shu Huang, Michael Hsiao, Tsung-Tse Lee, Shun-Min Yang, Ting-Kuo Lee, Nan-Yow Chen, Sung-Sen Yang, Ann Chen & Shuk-Man Ka: “Differential synchrotron X-ray imaging markers based on the renal microvasculature for tubulointerstitial lesions and glomerulopathy” Scientific Reports, 7, 3488 (2017). DOI: 10.1038/s41598-017-03677-x
1. Abiodun Ogunleke, Vladimir Bobroff, Hsiang-Hsin Chen, Jeremy Rowlette, Maylis Delugin, Benoit Recur, Yeukuang Hwu, Cyril Petibois: “Fourier-transform vs. Quantum-Cascade-Laser infrared microscopes for histo-pathology: from lab to hospital?” TRAC-Trends in Analytical Chemistry, 89, 190-196 (2017). DOI: 10.1016/j.trac.2017.02.007.
2016
2. Pratiwi, Feby Wijaya; Hsia, Chih-Hao; Kuo, Chiung Wen; Yang, Shun-Min; Hwu, Yeu-Kuang; Chen, Peilin: “Construction of single fluorophore ratiometric pH sensors using dual-emission Mn2+-doped quantum dots” Biosensors & Bioelectronics 84 133-140 (2016). DOI: 10.1016/j.bios.2016.01.079
1. Chieh-Wei Chen, Jing-Hong Huang, Tsung-Ching Lai, Yi-Hua Jan, Michael Hsiao, Chung-Hsuan Chen, Yeu-Kuang Hwu and Ru-Shi Liu: “Evaluation of the intracellular uptake and cytotoxicity effect of TiO2 nanostructures for various human oral and lung cells under dark conditions”, Toxicol. Res. 5, 303-311 (2016). DOI: 10.1039/c5tx00312a
2015
11. Sheng-Feng Lai, Bai-Hung Ko, Chia-Chi Chien, Chia-Ru Chang, Shun-Ming Yang, Hsian-Hsin Chen, Cyril Petibois, Dueng-Yuan Hueng*, Shuk-Man Ka, Ann Chen, G. Margaritondo, Y. Hwu*: “Gold Nanoparticles as Multimodality Imaging Agents for Brain Gliomas”, J. Nanobiotechnology 13, 85 (2015). DOI: 10.1186/s12951-015-0140-2
10. Pei-Cheng Hsu, Edwin B. L. Ong, Chang-Hai Wang, Y. Hwu*, J. H. Je, and G. Margaritondo, Eng Soon Tok: “X-ray-induced Cu deposition and patterning on insulators at room temperature”, J. Synchrotron Rad. 22, 1524–1527 (2015). DOI: 10.1107/S1600577515015234
9. L.M. Bao*, G.L. Zhang*, Q.T. Lei, Y. Li, X.L. Li, Y.K. Hwu, J.M. Yi: “Microstructure of atmospheric particles revealed by TXM and a new mode of influenza virus transmission”, Nucl. Instrum. Meth. B 359, 167–172 (2015). DOI: 10.1016/j.nimb.2015.07.050
8. Min-Tsang Li, Chang-Hai Wang, Sheng-Feng Lai, Edwin B. L. Ong, Y. H. Chen, Chung-Kwei Lin, G. Margaritondo and Y. Hwu*: “X-ray irradiation synthesis of PEG-coated Au-Pd nanoparticles”, Nanotechnology 26, 355601 (2015). DOI: 10.1088/0957-4484/26/35/355601
7. Su Yong Lee, Do Young Noh*, Hae Chul Lee, Chung-Jong Yu, Yeukuang Hwu and Hyon Chol Kang: “Direct-write x-ray lithography using a hard x-ray Fresnel zone plate”, J. Synchrotron Radiat. 22 781-785 (2015). DOI: 10.1107/S1600577515003306
6. F. Albertin, A. Astolfo, M. Stampanoni, E. Peccenini, Y. Hwu, F. Kaplan, G. Margaritondo: “ X-ray spectrometry and imaging for ancient administrative handwritten documents” X-Ray Spectrometry, 44(3), 93-98 (2015). DOI: 10.1002/xrs.2581
5. F. Albertin, A. Astolfo, M. Stampanoni, E. Peccenini, Y. Hwu, F. Kaplan, G. Margaritondo: “Ancient administrative handwritten documents: X-ray analysis and imaging”, J. Synchrotron Radiat. 22 446-451 (2015). DOI: 10.1107/S1600577515000314
4. Kuo-Hao Lee, Sheng-Feng Lai, Yan-Cheng Lin, Wu-Ching Chou, Edwin B.L. Ong, Hui-Ru Tan, Eng Soon Tok, C. S. Yang, G. Margaritondo and Y. Hwu*: “Gold Nanoparticles: BSA (Bovine Serum Albumin) Coating and X-ray Irradiation Produce Variable-spectrum Photoluminescence”, Mater. Chem. Phys. 149-150, 582-586 (2015). DOI: 10.1016/j.matchemphys.2014.11.009
3. Chien-Hung Chen, Fong-Sian Lin, Wei-Neng Liao, Sanching L. Liang, Min-Hua Chen, Yo-Wen Chen, Wan-Yu Lin, Ming-Hua Hsu, Mei-Ya Wang, Jinn-Jer Peir, Fong-In Chou, Chin-Ya Chen, Sih-Yu Chen, Su-Chin Huang, Mo-Hsiung Yang, Dueng-Yuan Hueng, Yeukuang Hwu, Chung-Shi Yang, and Jen-Kun Chen: “Establishment of a Trimodality Analytical Platform for Tracing, Imaging and Quantification of Gold Nanoparticles in Animals by Radiotracer Techniques”, Anal. Chem. 87 (1), 601–608 (2015). DOI: 10.1021/ac503260f
2. Min-Tsang Li, Chang-Hai Wang, Sheng-Feng Lai, Yu-Han Chen, Edwin B. L. Ong, Chung-Kwei Lin, G. Margaritondo and Y. Hwu*: “Catalytic properties of uncapped Au-Pd nanoparticles”, RSC Adv. 5, 61846-61850 (2015). DOI: 10.1039/c5ra10915a
1. Sheng-Feng Lai, Hui Ru Tan, Eng Soon Tok, Yu-Han Chen, Edwin B. L. Ong, Min-Tsang Li, Yi-Yun Chen, Fan-Ching Chien, Peilin Chen, Giorgio Margaritondo and Yeukuang Hwu: “Optimization of Gold Nanoparticle Photoluminescence by Alkanethiolation”, Chem. Commun. 51 7954-7957 (2015). DOI: 10.1039/C5CC01229E
2014
12. Yueh-Lin Tsai, Chia-Wei Li*, Tzay-Ming Hong, Jen-Zon Ho, En-Cheng Yang, Wen-Yen Wu, G. Margaritondo, Su-Ting Hsu, Edwin B. L. Ong and Y. Hwu*: “Firefly Light Flashing: Oxygen Supply Mechanism”, Phys. Rev. Lett. 113, 258103 (2014). DOI: 10.1103/PhysRevLett.113.258103
11. Chan Kim, Yoonhee Kim, Changyong Song, Sang Soo Kim, Sunam Kim, Hyon Chol Kang, Yeukuang Hwu, Ku-Ding Tsuei, Keng San Liang, and Do Young Noh∗: “Resolution enhancement in coherent x-ray diffraction imaging by overcoming instrumental noise”, Optics Express 22, 29161–29169 (2014). DOI: 10.1364/OE.22.029161
10. Y. Hwu* and Edwin B. L. Ong: “X-ray nanotechnology for biomedical imaging” J. Neurochemistry 130, 23-23 (2014).
9. C. Petibois*, V. Bobroff, A.Travo, H. H. Chen, S. Javerzat, Y. Hwu: “Application of X-ray/Infrared multimodal imaging on nanoparticles in glioma research”, J. Neurochemistry 130, 23-23 (2014).
8. A. Y. -L. Tsai, S. -T. Hsu, E. B. -L. Ong, Y. K. Hwu and A. Teo*: “Methyltransferase in the brain”, J. Neurochemistry 130, 23-23 (2014).
7. Xiaojing Huang, Hanfei Yan, Ross Harder, Yeukuang Hwu, Ian K. Robinson, and Yong S. Chu: “Optimization of overlap uniformness for ptychography”, Opt. Express 22 12634 (2014). DOI: 10.1364/OE.22.012634
6. Chia-Ling Chan, Kai K. Ewert, Ramsey N.Majzoub, Yeu-Kuang Hwu, Keng S. Liang, Cecilia Leal, Cyrus R Safinya: “Optimizing cationic and neutral lipids for efficient gene delivery at high serum content”, J. Gene Medicine 16(3-4) 84-96 (2014). DOI: 10.1002/jgm.2762
5. E. Nazaretski, X. Huang, H. Yan, K. Lauer, R. Conley, N. Bouet, J. Zhou, W. Xu, D. Eom, D. Legnini, R. Harder, C.-H. Lin, Y.-S. Chen, Y. Hwu and Y. S. Chu: “Design and performance of a scanning ptychography microscope”, Rev. Sci. Instrum. 85, 033707 (2014). DOI: 10.1063/1.4868968
4. Yu-Sheng Chen, Huang-Han Chen, Tsung-Tse Li, Edwin Ong, Jun Lim, Giorgio Margaritondo, En-Te Hwu and Yeukuang Hwu*: “A Compact Synchrotron-based Transmission X-ray Microscope”, J. Synchrotron Radiat. 21, 376-9 (2014). DOI: 10.1107/S1600577513031640
3. C. -C. Cheng, C. -C. Chien, H. -H. Chen, Y. Hwu, Y. -T. Ching: “Image Alignment for Tomography Reconstruction from Synchrotron X-Ray Microscopic Images”. PLoS ONE 9(1): e84675 (2014). DOI: 10.1371/journal.pone.0084675
2. Pei-Rung Wu, Bo-Rui Chen, Chi-Chun Hsieh, Wei-Chung Lin, Kenneth K. Wu, Yeukuang Hwu and Pei-Feng Chen: “The N-terminal portion of autoinhibitory element modulates human endothelial nitric-oxide synthase activity through coordinated controls of phosphorylation at Thr(495) and Ser(1177)”, Bioscience Reports 34 443-455 (2014). DOI: 10.1042/BSR20140079
1. Yu-Chuen Huang, Yuh-Cheng Yang, Kai-Chien Yang, Hui-Ru Shieh, Tao-Yeuan Wang, Yeukuang Hwu, and Yu-Jen Chen: “Pegylated Gold Nanoparticles Induce Apoptosis in Human Chronic Myeloid Leukemia Cells”, BioMed Research International, 2014, 182353, (2014). DOI: 10.1155/2014/182353